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PAPER NOTE · 06 / CELL DEATH & INFLAMMATION

Gasdermin pores are not limited to the plasma membrane: the N-terminal fragments of GSDME and GSDMD can also permeabilize mitochondria

Introduction: The authors deleted GSDME in human leukemia cells, initially expecting only a reduction in pyroptosis. Instead, caspase-3 activation itself became slower and weaker. A recognized downstream substrate of caspase-3 was influencing caspase-3 activation in return—this paper shows why: besides the plasma membrane, GSDME-N targets a second membrane compartment, the mitochondria.

Nature Communications · 20198 min readDiscuss this paper
Start with the experimental question
Caspase-3 cleavage generates GSDME-N, which permeabilizes mitochondria and releases cytochrome c. The APAF1 apoptosome amplifies caspase-3 and yields more GSDME-N.
HIGHLIGHTS (interpretation summary)
  • 01

    Main finding: GSDME deletion slows and weakens caspase-3 activation across multiple cell types and apoptotic stimuli; GSDME is both a downstream substrate and an upstream amplifier of caspase-3;

  • 02

    Key mechanism: GSDME-N permeabilizes the outer mitochondrial membrane to release cytochrome c, activating more caspase-3 through the apoptosome and creating a positive feedback loop;

  • 03

    Significance: Mitochondrial permeabilization is a shared property of the gasdermin family; GSDMD-N and GSDMA-N can also do this, allowing inflammasome activation to connect to the apoptotic pathway.

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1. What question does this paper answer?

GSDME executes pyroptosis after cleavage by caspase-3, an established downstream function. This paper asks: Does GSDME also influence the apoptotic pathway itself in return? The answer is yes: besides forming pores in the plasma membrane, GSDME-N permeabilizes mitochondria to release cytochrome c and amplifies caspase-3 activation through the APAF1 apoptosome. GSDMD-N has the same capability.

2. Following the chain of evidence

Step 1: Discover that GSDME influences caspase-3 activation (Figs. 1–3). The authors induced apoptosis with a glucocorticoid in CEM-C7 leukemia cells. After CRISPR deletion of GSDME, not only was pyroptosis reduced, but the speed and magnitude of caspase-3 activation also decreased markedly. This phenotype was reproducible in immortalized macrophages, melanoma cells, thymoma cells and with other apoptotic stimuli. The authors also found that a phosphomimetic mutation of threonine at position 6 of GSDME, T6E, disrupted oligomerization and thereby abolished pore-forming activity; caspase-3 activation was likewise weaker in cells reconstituted with the T6E mutant. These results show that GSDME's enhancement of caspase-3 depends on its pore-forming activity itself, rather than other functions of the cleaved fragment.

Figure 1Complete original figure
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Rogers 2019, complete Figure 1, panels a–h
Figure 1. Complete original figure from Rogers et al. (2019).

Step 2: Demonstrate that GSDME-N directly permeabilizes mitochondria (Figs. 4–5). Imaging showed that GSDME-N colocalized with mitochondria, and the mitochondrial protein HtrA2 was released before plasma membrane rupture. In vitro, the authors incubated purified mitochondria with caspase-3-cleaved GSDME and directly observed cytochrome c release, whereas the T6E mutant had no effect. These results show that GSDME-N can directly permeabilize the outer mitochondrial membrane, releasing cytochrome c and other pro-apoptotic factors.

Figure 5Complete original figure
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Rogers 2019, complete Figure 5, panels a–e
Figure 5. Complete original figure from Rogers et al. (2019).

Step 3: Confirm an amplification pathway operating in parallel with tBid (Figs. 6–7). In death receptor signaling, caspase-8 activates the mitochondrial pathway by cleaving Bid. The authors tested whether GSDME was redundant with this mechanism. In TNFα-treated CEM-C7 cells, deleting either Bid or GSDME slowed caspase-3 activation, and deleting both weakened it further. In APAF1-knockout cells, ectopically expressed GSDME-N could not activate caspase-3 at all, showing that this amplification loop must act through the apoptosome. These results show that GSDME-N amplifies caspase-3 activation through the mitochondria–apoptosome pathway, resulting in cleavage of more GSDME and creating a positive feedback loop that operates in parallel with the tBid pathway.

Figure 7Complete original figure
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Rogers 2019, complete Figure 7, panels a–f
Figure 7. Complete original figure from Rogers et al. (2019).

Step 4: Extend the findings to GSDMD and in vivo (Figs. 8–9). In macrophages transfected with cytosolic LPS, the authors found that GSDMD deletion markedly delayed and weakened caspase-3 activation, whereas ASC deletion had no effect. Overexpression of either GSDMD-N or GSDMA-N also released cytochrome c and activated caspase-3. In vivo, GSDME-knockout B16 melanomas grew faster after subcutaneous implantation in mice. These results show that mitochondrial permeabilization is a shared property of the gasdermin family and that GSDME's pro-death function has tumor-suppressive significance.

Figure 8Complete original figure
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Rogers 2019, complete Figure 8, panels a–d
Figure 8. Complete original figure from Rogers et al. (2019).

3. Implications for experiments

  1. Changes in apoptotic markers after gasdermin deletion should not be surprising: GSDME/GSDMD deletion can slow caspase-3 activation itself, a factor to consider when interpreting caspase-3 cleavage bands.
  2. Distinguish the timing of mitochondrial release from plasma membrane rupture: Mitochondrial proteins are released before plasma membrane rupture; readouts that conflate the two into a single time point would miss the direct action of GSDME-N.
  3. Pay attention to phosphorylation-dependent regulation: The T6E phosphomimetic mutation allows GSDME-N to reach the membrane but prevents oligomerization. Detecting "membrane localization" is not the same as detecting "activity".

4. Connections with other papers on this site

(The cross-paper comparisons above are a synthesis, rather than direct conclusions of any one original paper.)

What remains unresolved

Limitations: ① The specific molecular mechanism by which GSDME-N permeabilizes mitochondria, including whether it binds cardiolipin, was not established; ② the upstream kinase and physiological setting of T6 phosphorylation were not determined.

PRIMARY RESEARCH

Gasdermin pores permeabilize mitochondria to augment caspase-3 activation during apoptosis and inflammasome activation

Corey Rogers; Dan A Erkes; Alexandria Nardone; Andrew E Aplin; Teresa Fernandes-Alnemri; Emad S Alnemri Nature Communications. 2019;10:.

Figures are from the verified original paper stored in the library. Original labels, axes and controls are retained; figure numbers and sources are registered in the library.

References
  1. Rogers C, Erkes DA, Nardone A, et al. Gasdermin pores permeabilize mitochondria to augment caspase-3 activation during apoptosis and inflammasome activation. Nat Commun. 2019;10:1689. doi:10.1038/s41467-019-09397-2
  2. Rogers C, Fernandes-Alnemri T, Mayes L, et al. Cleavage of DFNA5 by caspase-3 during apoptosis mediates progression to secondary necrotic/pyroptotic cell death. Nat Commun. 2017;8:14128.
  3. Tsuchiya K, Nakajima S, Hosojima S, et al. Caspase-1 initiates apoptosis in the absence of gasdermin D. Nat Commun. 2019;10:2091.

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